Develop accessible tools for reproducible ecosystem modeling and forecasting

Why PEcAn?

Climate change science has witnessed an explosion in the amount and types of data that can be brought to bear on the potential responses of the terrestrial carbon cycle and biodiversity to global change. Many of the most pressing questions about global change are limited by our ability to synthesize existing data. Predictive Ecosystem Analyzer (PEcAn) project specifically seeks to improve this ability. Ultimately, PEcAn aims to make ecosystem modelling and data assimilation routine tools for answering scientific questions and informing policy and management.

How does PEcAn do that?

PEcAn consists of 1) state-of-the-art ecosystem models that themselves are scaffolds for integrating multiple data sources and theory, 2) a workflow management system to handle the numerous streams of data, and 3) a data assimilation statistical framework in order to synthesize the data with the model. PEcAn automates analyses aimed at understanding and forecasting ecosystem responses through these models.

Transparency, repeatability, accessibility

PEcAn's scientific workflow management fully captures the informatics of where the model inputs came from, how they were processed, how sets of model runs were completed, and how the model output was post-processed and visualized for maximizing transparency and repeatability. PEcAn's intuitive web-based interface allows non-modelers or novices to use models and techniques developed by experts.

High functionality and performance

In addition to making the PEcAn source code open source, the system is also available as a fully functional virtual application that runs on a wide range of operating systems. The system can also interact with remote high-performance computing environments, allowing model runs to be done in parallel on remote clusters.

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Technologies

  • r
  • php
  • postgresql
  • javascript
  • c

Topics

  • Science and Medicine
  • ecosystem models
  • ecological forecasting
  • scientific visualization
  • data science
  • climate science
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PEcAn Project 2017 Projects

  • Aman Kumar
    Dockerization & New Instance Setup
    Currently the PEcAn stack is distributed using the VM’s. The Aim is to replace the current VM distributions technique with the docker containers and...
  • Anne Thomas
    Model Benchmarking in PEcAn
    PEcAn is an ecological modelling toolbox with the capability to automate, preserve, and repeat model runs. One functionality still in the early...
  • Shubham Agarwal-1
    Scientific Visualization Project for PEcAn
    The PEcAn (Predictive Ecosystem Analyser) project is an open source system for ecosystem modelling and forecasting. With huge amount of climatic and...
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2017