caMicroscope

Toolkit for cancer imaging research

Technologies
python, javascript, mongodb, tensorflow, medical imaging
Topics
machine learning, distributed systems, science and medicine, data integration
http://camicroscope.github.io
Toolkit for cancer imaging research

caMicroscope is a digital pathology data management, visualization and analysis platform. It consists of a set of web services to manage digital pathology images, associated clinical and imaging metadata, and human/machine generated annotations and markups. The image visualization client consists of HTML5 based web clients that support interactive rendering of the digitized image, and the creation and display of annotations and markups. In addition to the core caMicroscope digital pathology management framework, caMicroscope organization also consists of several other open source tools, in the domains of healthcare and big data. caMicroscope is used by several medical research organizations.

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2021 Program

Successful Projects

Contributor
Vedant Nandoskar
Mentor
Birm, Akhil Rana
Organization
caMicroscope
Real Time Collaborative Pathology
This project aims to develop a feature for Real Time Collaboration on the caMicroscope Slide Viewer which would give users the ability to work...
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Contributor
Hemansh Khaneja
Mentor
Birm, NAN LI
Organization
caMicroscope
Cross-Slide Coordinated Viewing
Often, it's useful for users to compare different results on an image. To facilitate this, caMicrocope supports viewing the same image with different...
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Contributor
Yash Kumar Verma
Mentor
Birm
Organization
caMicroscope
RBAC Authorization with Cache Implementation using higher order functions
Currently, caMicroscope uses attribute-based access control, which does not clearly represent the notion of authorization in users and faces...
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Contributor
Rohan Mallick
Mentor
Birm, Insiyah Hajoori
Organization
caMicroscope
Smart Pens
This project would involve adapting pathology annotation tools to prefer following edges in the base image when close and also add other smart...
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Contributor
Peddi Sai Varshith
Mentor
NAN LI
Organization
caMicroscope
Integrate an optical microscope with a camera and motorized stage - Collaboration with FDA
eeDAP is an evaluation environment for Digital and Analog Pathology. The software has two modes one for digital WSI image evaluation and other for...
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