Contributor
Aishika Nandi

Visualize OncoKB annotation and patient report generation


Mentors
Hongxin, Ben Preiser
Organization
cBioPortal for Cancer Genomics
Technologies
api, typescript, SCSS, Storybook, JEST, npm
Topics
web, health, data, software
OncoKB™ is a crucial resource which provides comprehensive information about genomic alterations in cancer. However, despite the availability of APIs and annotation tools, some users, especially those without computational backgrounds, face challenges in effectively annotating variants and generating reports. To bridge this gap, my project seeks to publish a standalone npm package for visualization of OncoKB annotations and a report generation module to make the annotations downloadable by the users. Seamless integration of these modules with cBioPortal will mark the end of my project.