Global Alliance for Genomics and Health

We develop open standards and tools for genomics to benefit human health

Technologies
python, java, sql, spring, hl7 fhir
Topics
genomics, cloud, data discovery, healthcare, data security
We develop open standards and tools for genomics to benefit human health

The Global Alliance for Genomics and Health (GA4GH) was formed to help accelerate the potential of genomic medicine to advance human health. It brings together over 500 leading genome institutes and centers with IT industry leaders to create global standards and tools for the secure, privacy respecting and interoperable sharing of Genomic data.

2021 Program

Successful Projects

Contributor
Akash Saini
Mentor
Alexander Kanitz, Sarthak Gupta, Alvaro Gonzalez Alvarez, Tewodros Deneke, Sebastian Beyvers, Kushagra Nagori
Organization
Global Alliance for Genomics and Health
Brokering Continuous Delivery through the ELIXIR Cloud service registry
The solution will act as a BROKER that manages subscriptions for update notifications for each deployment subscribed by system administrators System...
Contributor
Marko Malenic
Mentor
Michael Macias, Christian PĂ©rez Llamas, Victor San Kho Lin, Roman Valls Guimera
Organization
Global Alliance for Genomics and Health
Pure Rust Htsget Implementation
The aim of this proposal is to build a pure Rust serverless implementation of htsget - a client/server protocol for reliably and securely sending...
Contributor
Kamil Albrycht
Mentor
Andrew Grant, Tim Jackson
Organization
Global Alliance for Genomics and Health
React diagram component library for creating pedigree drawings tools
Scope Project scope is to develop a React.js library of pedigree components that will meet the GA4GH standards. Library will be build of accessible...
Contributor
Vipul Chhabra
Mentor
Kyle Ellrott, Alexander Kanitz
Organization
Global Alliance for Genomics and Health
Implement TES in Galaxy/Pulsar
To increase the interoperability of the Galaxy Platform with GA4GH Cloud-compliant solutions, the goal of this project is to add support for the TES...
Contributor
Anurag Gupta
Mentor
Alexander Kanitz, Krish Agarwal, Sarthak Gupta, Kushagra Nagori
Organization
Global Alliance for Genomics and Health
Implement reusable GA4GH UI clients
This project is based on the idea of the simplest form of micro-frontends that we can provide our users with our services like Cloud Registry, TRS,...
Contributor
Daniel del Castillo
Mentor
Roman Valls Guimera
Organization
Global Alliance for Genomics and Health
Pure Rust serverless htsget implementation
The goal of this proposal would be to implement the htsget protocol in pure Rust using the noodles crate. It also has the objective of making a...
Contributor
Rohan Gupta
Mentor
Bob Dolin, Shailesh Gothi, Srikar Chamala
Organization
Global Alliance for Genomics and Health
vcf2fhir for Structural Variants
vcf2fhir is a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration. The utility currently converts simple variants (SNVs,...